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Trump administration officials are telling staff members of the coronavirus task force that the White House plans to wind down the operation in the weeks to come despite growing evidence that the crisis is raging on, Maggie Haberman reports.

It is not clear whether any other group might replace the task force. But its gradual demise, which officials said might never be formally announced, would only intensify questions about whether the administration is adequately organized to address the complex, life-and-death decisions related to the virus and give adequate voice to scientists and public health experts in making policy.

Asked about the New York Times report, Vice President Mike Pence, who has helped oversee the task force, acknowledged that the administration was “having conversations” about winding it down.

“We’re having conversations about that, and about what the proper time is for the task force to complete its work and for the ongoing efforts to take place on an agency-by-agency level,” Mr. Pence told reporters, adding that the task force could wrap up its work by early June.

While the task force’s advice has sometimes been swept aside by Mr. Trump and its recommendations for criteria on reopening businesses defied by a number of states, it has served as the closest thing the White House has for running a centralized response to the pandemic.

A top adviser to Mr. Pence who has helped oversee the task force, Olivia Troye, has told senior officials to expect the group to wind down within weeks, a notice echoed by other top White House officials. While the task force met Tuesday at the White House, a meeting on Monday was canceled, and a Saturday session, a staple of recent months, was never held.

Mr. Trump has stopped linking his virus news briefings to the task force’s meetings and no longer routinely arrays task force members around him in his public appearances.

While the rate of new infections and deaths has been falling in New York, it has continued to rise in much of the rest of the country. A number of projections suggest that deaths will remain at elevated levels for months to come and could increase as states ease their stay-at-home orders. One document circulating inside the administration raised the possibility of a rise in coronavirus infections and deaths this month, reaching about 3,000 daily deaths on June 1 — nearly double the current level.

A senior administration official, speaking on the condition of anonymity in order to discuss internal deliberations, said the task force would be winding down as the White House moved toward Phase One of Mr. Trump’s plan to “open up” the country. The focus now will be on therapeutics, vaccine development and testing, the official said.

A White House spokeswoman declined to comment.

Mr. Pence said the White House would keep Dr. Deborah L. Birx, the coronavirus response coordinator, “around every bit as long as we need to.”

A group led by Jared Kushner, Mr. Trump’s son-in-law and senior adviser, has been functioning as something of a shadow task force. That group is likely to continue working; among other issues, Mr. Kushner is said to be discussing a new role for someone to oversee development of therapeutic treatments.

From its start in January, the task force has been rived with divisions. Health Secretary Alex M. Azar II has been criticized for excluding key administration officials and was ousted as the leader of the group; he was replaced by Mr. Pence in late February. Mr. Trump took over the public briefings, often turning them into 90-minute to two-hour moments to air grievances, praise his own handling of the crisis and offer up his own prescriptions.

A federal scientist who says he was ousted from his job amid a dispute over an unproven malaria drug promoted by Mr. Trump said on Tuesday that a top official at the Department of Health and Human Services repeatedly pressured him to steer millions of dollars in contracts to the clients of a well-connected consultant, Sheryl Gay Stolberg reports.

Dr. Rick Bright, who was the director of the Biomedical Advanced Research and Development Authority until his removal in April, said in a formal whistle-blower complaint that since 2017 he has been protesting “cronyism and award of contracts to companies with political connections to the administration,” including a drug company executive who is close to Mr. Kushner, Mr. Trump’s son-in-law and senior adviser.

The 89-page complaint, filed with the Office of Special Counsel, which protects federal whistle-blowers, also said Dr. Bright “encountered opposition” from his Health and Human Services superiors — including Mr. Azar — while pushing as early as January for the necessary resources to develop drugs and vaccines to counter the emerging pandemic.

But the complaint says Dr. Bright found an ally in Peter Navarro, Mr. Trump’s trade adviser, who “shared Dr. Bright’s sense of urgency, recognized his expertise and was prepared to help.”

Officials named in the complaint were not available for immediate comment. A consultant named in the complaint, John Clerici, said, “I unequivocally deny all of the allegations lodged by Dr. Bright and his lawyers.”

“It’s sad that during a pandemic, Dr. Bright and his team have chosen to distract people like Dr. Kadlec, who are critical to the response, with politically motivated allegations,” Mr. Clerici said, referring to Robert Kadlec, the assistant secretary for preparedness and response at Health and Human Services. “The record is clear that his allegations are false and will be proven so.”

The report provides a window into the inner workings of BARDA, a tiny agency created in 2006 as a response to the Sept. 11, 2001, attacks. It partners with industry in developing so-called “medical countermeasures” that can be stockpiled by the federal government to combat biological or chemical attack, and pandemic threats.

BARDA has spent billions of dollars, awarding more than 235 contracts through 2018 to dozens of different suppliers, including major pharmaceutical companies and smaller biotech firms. So far, more than 50 BARDA-supported products have been approved by the Food and Drug Administration.

Hundreds of Wendy’s restaurants have run out of hamburgers. Kroger, the largest supermarket chain in the United States, is limiting the amount of ground beef and pork that customers can buy at some stores. And Costco, where shoppers typically buy in bulk, has placed a three-product cap on purchases of fresh beef, poultry and pork.

Over the past month, dozens of meatpacking plants across the country have shut down because of outbreaks, raising concerns about the U.S. meat supply. Now, the effects of those disruptions are reaching customers at grocery stores and fast-food drive-throughs, where certain types of meat are becoming harder to find.

On Monday, nearly one in five Wendy’s restaurants — a total of 1,043 locations — were completely sold out of beef products, including burgers, according to an analysis by the financial firm Stephens, which examined every Wendy’s online menu in the United States.

“Some of our menu items may be temporarily limited at some restaurants in this current environment,” a Wendy’s spokesman said in a statement on Tuesday. “It is widely known that beef suppliers across North America are currently facing production challenges.”

At the same time, some grocery stores have announced limits on meat purchases. In addition to Costco and Kroger, Hy-Vee said on Tuesday that it would restrict customers to four packages of fresh beef, ground beef, pork and chicken.

Stores are also anticipating that certain products may become more difficult to find. A Wegman’s spokeswoman said on Tuesday that the chain “may not have every product cut or variety available for the next few weeks.”

While the worst-hit parts of the United States have seen new infections recede and hospitalizations drop after strict social distancing measures were put in place, new outbreaks have emerged elsewhere in the country, providing a steady, unrelenting march of deaths and infections.

As states continue to lift restrictions, impatient Americans are freely returning to shopping, lingering in restaurants and gathering in parks. New flare-ups and super-spreader events are expected to be close behind.

New Reported Cases by Day

As the New York metro area has seen a recent decline in new cases, the number of cases in the rest of the United States has steadily increased.

New York metro area
Rest of the United States
Source: New York Times database of reports from state and local health agencies and hospitals.·The New York City metropolitan area is defined by the U.S. Census Bureau and includes nearby cities and suburbs in Westchester, Long Island and northern New Jersey.

Julie Bosman, Mitch Smith and Amy Harmon report that any notion that the threat is fading away appears to be magical thinking, at odds with what the latest numbers show.

Coronavirus in the United States now looks like this: More than a month has passed since there was a day with fewer than 1,000 deaths from the virus. Almost every day, at least 25,000 new cases are identified, meaning that the total in the United States — which has the highest number of known cases in the world with more than a million — is expanding by 2 to 4 percent daily.

Rural towns that one month ago were unscathed are suddenly hot spots. It is rampaging through nursing homes, meatpacking plants and prisons, killing the medically vulnerable and the poor, and new outbreaks keep emerging, an ominous harbinger of what a full reopening of the economy could bring.

A panoramic view of the country reveals a grim and distressing picture.

“If you include New York, it looks like a plateau moving down,’’ said Andrew Noymer, an associate professor of public health at the University of California, Irvine. “If you exclude New York, it’s a plateau slowly moving up.”

It is not just the major cities. Smaller towns and rural counties in the Midwest and South have suddenly been hit hard, underscoring the capriciousness of the pandemic.

Dakota County, Neb., which has the third-most cases per capita in the country, had no known cases as recently as April 11. Now the county is a hot zone for the virus.

“It’s the balance of something that’s a very difficult choice, like how many deaths and how much suffering are you willing to accept to get back to what you want to be, some form of normality, sooner rather than later?” Dr. Anthony Fauci, the administration’s top infectious disease official, said Monday on CNN.

Mr. Trump is traveling to Phoenix Tuesday where he will tour a Honeywell International Inc. plant that is manufacturing medical masks and will also hold a round table on Native American issues.

The trip is an opportunity for the president, who has been criticized for not doing more to prepare for the virus, to demonstrate that vital supplies are being manufactured on a mass scale. It also brings him to a potential battleground state for his re-election campaign. Mr. Trump held one of his last campaign rallies in Phoenix on Feb. 19, before social distancing practices were put into effect. His last rally was in Charlotte, N.C., on March 2.

Mr. Trump briefly spoke with reporters before departing on Marine One from the South Lawn, responding to questions about an internal federal report that projected a steep rise in cases over the next month even as states begin reopening.

Mr. Trump downplayed the document, first reported by The Times, saying, “That’s a report with no mitigation. We’re doing a lot of mitigation.”

While travel could put Mr. Trump and his staff at greater risk of exposure to the virus, he insisted that his trip would be safe. “Everybody traveling has been tested. Literally, they have been tested in the last hour,” he said, adding that White House test kits return results within five minutes.

Mr. Trump said that he would don a mask for his visit to the Honeywell plant “if it’s a mask facility.” It was unclear whether he meant the plant’s guidelines for mask usage or the nature of its production, which is the manufacturer of medical masks.

As Mr. Trump prepared to leave for Arizona, the Treasury Department announced Tuesday that it would begin distributing $4.8 billion in aid allocated for Native American tribes in the stimulus package, releasing a stalled tranche of funds that the tribes had sued to obtain.

A group of tribes had sued Steven Mnuchin, the Treasury secretary, and the department after the administration failed to provide any of the $8 billion set aside for tribal governments, or to announce its criteria for disbursing it, before a late-April statutory deadline. The delay dealt another blow to some of the most vulnerable and hardest hit communities in the country.

Arizona’s governor, Doug Ducey, a Republican, has been relatively cautious about reopening the state’s economy in comparison to other Republican governors in the country. Official figures show that the state has had 8,919 cases and 362 deaths, though infectious disease specialists say the state is probably undercounting deaths.

At a Senate confirmation hearing on Tuesday, Brian D. Miller, Mr. Trump’s nominee for the role of a special inspector general, attempted to defuse fears that he was not independent enough for the prominent watchdog role amid concerns that his current position as a White House lawyer means he would be putting Mr. Trump’s interests ahead of those of American taxpayers.

Lawmakers created the inspector general role to oversee funds that are part of the $2 trillion economic relief package that Congress passed in March, including money that is being used to support the Federal Reserve’s emergency lending facilities, along with money for loans and grants to airlines and other companies that are deemed critical for national security.

The nomination, which requires Senate confirmation, has not been received well by Democrats, who insisted on strict oversight as a condition of passage.

In an unusual signing statement, Mr. Trump suggested he had the power to decide what information a newly created inspector general intended to monitor the fund could share with Congress. That prompted concern among lawmakers and watchdog groups, which said Mr. Trump’s statement went further than previous presidents in limiting the inspector general’s authority.

For more than two hours, Mr. Miller was grilled by senators about the president’s statement and his willingness to defy the White House if necessary. He said that the law governing inspectors general would require him to report wrongdoing to Congress, suggesting that he would not comply with that statement, and he insisted that he would resign or accept being fired if he faced political pressure from Mr. Trump.

“I will be independent,” Mr. Miller said. “If the president removes me, he removes me. If I am unable to do my job, I will resign.”

Mr. Miller brings strong credentials to the job. A former federal prosecutor, he also served as the inspector general of the General Services Administration from 2005 to 2014, overseeing a sprawling agency in charge of the federal government’s real estate.

In 2018, Mr. Miller joined the White House counsel’s office and worked on the team defending Mr. Trump during his impeachment proceedings.

Two businessmen were arrested on Tuesday on charges of attempting to defraud the government’s small business lending program, marking the first federal fraud charges related to the $660 billion program that was aimed at helping businesses hurt by the coronavirus pandemic but has been riddled with problems.

The men, David Staveley of Andover, Mass., and David Butziger of Warwick, R.I., were accused of conspiring to file false bank loan applications falsely claiming that Mr. Staveley needed government assistance for three struggling restaurants that employed dozens of people, the U.S. attorney’s office in Rhode Island said.

The men sought about half-million dollars in loans through the federal government’s Paycheck Protection Program, which is intended to help businesses pay employees; the loans would be forgiven if Mr. Staveley met certain requirements.

But the employees did not exist, two of the three restaurants had closed weeks before the coronavirus pandemic shuttered restaurants nationwide and Mr. Staveley had no relationship with the third restaurant on the application, prosecutors said. Lawyers for the men could not be immediately found.

Health care workers across the country continue to risk their lives to care for virus patients. The Times has collected stories from nurses, doctors and E.M.T.s from around the world about what keeps them up at night and what inspires them to keep fighting.

The Trump administration is considering a wide range of tax-cut proposals for businesses and investors in the next bill as it attempts to shift from government spending programs to support the economy toward measures that aim to reinvigorate growth.

The list of ideas under discussion includes a reduction in the capital gains tax rate and measures that would allow companies to deduct the full costs of any investments they make now or in the future, according to administration officials and several outside experts who have discussed plans with the White House.

Those proposals, which are still being debated and not final, could accompany Mr. Trump’s top two priorities for the next package: the suspension of payroll taxes for workers and an expanded deduction for corporate spending on meals and entertainment.

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The Senate returned for its first week of regular business, a move that Congress’s top doctor said carried health risks.CreditCredit...Gabriella Demczuk for The New York Times

Senators donned face masks. The floors and sidewalks of Capitol Hill were marked with circular panels emblazoned with images of feet to show lawmakers and aides where to stand to keep a safe social distance. Congressional employees’ desks were ensconced in plexiglass shields.

With the United States Senate back in Washington for a session that Congress’s top doctor said carried health risks, the chamber has quickly resumed its routine. Senators across the country traveled back to the Capitol in time for a confirmation vote on Monday at 5:30 p.m., with one or two stragglers rushing to the floor in the jeans they wore on the plane to Washington.

A hearing unfolded on Tuesday morning in a half-empty room, in line with new policies to avert the spread. Senator Mitch McConnell of Kentucky, the majority leader, readied yet another vote on a lifetime judicial appointment.

Senator Rand Paul, Republican of Kentucky, the sole senator to have tested positive, was among the only senators walking around without a mask. With nearly half of the senators over the age of 65, putting them at higher risk, the pandemic has prompted an undercurrent of anxiety in a building unaccustomed to accommodating for personal space.

Summoned back to Capitol Hill for the first time in 40 days, the Senate, an institution loath to change, found itself doing just that.

Sparse attendance is now mandated at hearings to ensure appropriate distance between senators. The weekly Republican lunch was moved out of the stately but small, Vermont marble- and black walnut-paneled Mansfield Room in the Capitol to a larger space in an unnamed room tucked away in an office building nearby. Senate Democrats outright canceled their lunch and conducted it by phone.

Later in the day, an attempt by Democrats, led by Senator Chuck Schumer of New York, the minority leader, to unanimously pass legislation to require public reporting every day and week on which businesses were benefiting from small business lending programs, was blocked by Senator Marco Rubio, Republican of Florida, the chairman of the Small Business Committee.

“I just think this agency is already struggling to manage this massive program, and to add an additional requirement without thinking it through would have unintended consequences of potential slowing the program through,” Mr. Rubio said.

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Gov. Andrew M. Cuomo of New York urged all New Yorkers to wear masks, and warned against reopening the state too quickly.CreditCredit...Victor J. Blue for The New York Times

New York’s state Health Department statistics released late Monday included the previously undisclosed deaths of more than 1,600 people who were presumed to have died of the virus at nursing homes but who had not received a confirmed diagnosis.

By May 3, according to the new data, 4,813 people had died of the virus at nursing homes. The new data did not include nursing home residents who died in hospitals.

The number of deaths of nursing home residents, either at homes or in hospitals, was 3,025 on April 28, and approximately 100 more people died at nursing homes from April 29 to May 2, according to state figures.

A spokesman for the department said officials had revised the state’s system for gathering and evaluating data from homes and that figures would probably continue to be revised.

The hardest hit homes have been in New York City and its suburbs. David C. Grabowski, a Harvard University researcher who studies nursing homes, said that when the final data is in, nursing homes will probably account for about half of all of the Covid-19 deaths in every state, as they already do in Massachusetts, New Jersey and Pennsylvania, among others.

Nursing homes long fought against the release of death counts for individual facilities, arguing that a high death count might not indicate poor infection control and might scare families unnecessarily. In New York State, even with the new probable deaths added, nursing homes now account for only about 25 percent of the state’s fatalities. On Tuesday, Gov. Andrew M. Cuomo reported 230 more deaths overall in the state.

In New Jersey, more than half of the virus-related deaths have involved people living in long-term care facilities, the governor said on Tuesday.

In Connecticut, the governor said Tuesday that in-person classes at all public K-12 schools would be canceled for the rest of the academic year, a move that came after New York and New Jersey took the same step.

Fewer children get infected than adults, and most of those who do have mild symptoms, if any. But answering the question of whether they transmit the virus to adults is key to deciding whether and when to reopen schools, a step that Mr. Trump has urged states to consider before the summer.

Two new studies offer compelling evidence that children can transmit the virus. Neither proved it, but the evidence was strong enough to suggest that schools should be kept closed for now, many epidemiologists who were not involved in the research said.

Reopening schools may nudge the epidemic’s reproduction number — the number of new infections estimated to stem from a single case — to dangerous levels in many U.S. communities, epidemiologists warned after reviewing the results from the new studies.

In one study, published in the journal Science, a team analyzed data from two cities in China — Wuhan and Shanghai — and found that children were about a third as susceptible to infection as adults were. But when schools were open, they found, children had about three times as many contacts as adults, and three times as many opportunities to become infected, essentially evening out their risk.

Based on their data, the researchers estimated that closing schools is not enough on its own to stop an outbreak, but it can reduce the surge by about 40 to 60 percent and slow the epidemic’s course.

“My simulation shows that yes, if you reopen the schools, you’ll see a big increase in the reproduction number, which is exactly what you don’t want,” said Marco Ajelli, a mathematical epidemiologist who did the work while at the Bruno Kessler Foundation in Trento, Italy.

The second study, by a group of German researchers, was more straightforward. The team tested children and adults and found that children who test positive harbor just as much virus as adults do — sometimes more — and so, presumably, are just as infectious.

In New York City, 15 children, many of whom had fallen ill with the virus, have recently been hospitalized with a mysterious syndrome that doctors do not yet fully understand but that has also been reported in several European countries, health officials announced on Monday night.

Many of the children, ages 2 to 15, have shown symptoms associated with toxic shock or Kawasaki disease, a rare illness in children that involves inflammation of the blood vessels, including coronary arteries, the city’s health department said.

According to the city’s Health Department, none of the patients have died, describing the illness as a “multisystem inflammatory syndrome potentially associated with Covid-19,” the disease caused by the virus.

The city’s health commissioner said in a statement that providers were being asked to flag patients meeting criteria. “And to parents,” the commissioner added, “if your child has symptoms like fever, rash, abdominal pain or vomiting, call your doctor right away.”

Immigration rights activists on Tuesday filed a federal lawsuit challenging a provision in the $2 trillion relief act that denies $500 payments to United States citizen children if one or both of their parents are undocumented immigrants, Michael D. Shear reports.

In addition to relief payments for adults, the act sends payments of $500 per child under 17 to the parents of families making $150,000 or less. But the adults are required to have social security numbers. Many undocumented immigrants, who are unable to get a social security number, file tax returns using an Individual Taxpayer Identification Number instead. Those families are unable to receive the relief payments.

The lawsuit, filed by CASA, an immigrant rights group, and the Institute for Constitutional Advocacy and Protection at Georgetown University, says the provision amounts to unconstitutional discrimination against the children, who are American citizens.

“The refusal to distribute this benefit to U.S. citizen children undermines the CARES Act’s goals of providing assistance to Americans in need, frustrates the Act’s efforts to jumpstart the economy, and punishes citizen children for their parents’ status,” the groups argue in the lawsuit, which was filed in United States District Court in Maryland.

The suit, which claims discrimination on behalf of several children, adds that the provision amounts to “punishment that is particularly nonsensical given that undocumented immigrants, collectively, pay billions of dollars each year in taxes. More fundamentally, this discrimination violates the equal protection principles embodied in the Fifth Amendment’s Due Process Clause.”

Lawsuits have already been filed on behalf of American citizens who are married to undocumented adults and file their taxes jointly are also unable to apply for their $1,200 relief payments. Tuesday’s suit focuses on the payments intended to benefit children who are American citizens.

The lawsuit notes that other means-tested federal benefits programs — like food stamps, child tax credits, and child nutrition programs — are not restricted in the same way.

Defenders of the provision note that children with so-called “mixed-status” parent — an undocumented parent married to a United States citizen — can receive the payments if their parents file their taxes separately rather than jointly. But the lawsuit points out that doing so often increases other tax obligations, effectively wiping out the relief payments.

“Thus, U.S. citizen children who have mixed-status parents are denied benefits equal to those available to similarly situated U.S. citizen children who have no undocumented parents,” the groups say in the lawsuit.

Two of the many projects underway to develop a vaccine announced that they had taken significant steps forward, both using a non-traditional approach based on genetic technology.

They aim to use the patient’s own cells as factories to churn out a protein that will stimulate the immune system.

Pfizer and the German pharmaceutical company BioNTech said that their experimental vaccine began human trials in the United States on Monday. If the tests succeed, the vaccine could be ready for emergency use here as early as September.

Researchers at two Harvard-affiliated hospitals reported that, based on promising results in mice, they have two vaccine candidates being manufactured for use in human trials that may begin later this year.

Unlike traditional vaccines that use killed or weakened viruses to provoke an immune response, these methods use genetic material that directs the patient’s cells to make a protein found on the virus. That protein should set off alarms in the immune system and train it to fight.

The Pfizer-BioNTech approach injects messenger RNA, which contains a blueprint for a virus protein.

The other method, developed at Massachusetts Eye and Ear and the Massachusetts General Hospital, uses a harmless virus to carry DNA with instructions for making a virus protein into the patient’s cells.

Some other vaccine projects also involve messenger RNA, and some use viruses to carry genetic material, though different viruses from the one chosen by the Harvard program.

Racing against the virus, researchers say many approaches are needed and that ideally, multiple efforts will succeed, because many manufacturers will be required to meet the urgent global need for vaccine.

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Dermatologists say that painful red or purple lesions on your toes should prompt testing for the virus, even though many patients have no other symptoms. Here’s what you need to know about chilblains and other virus symptoms.

Reporting was contributed by Julian E. Barnes, Katie Benner, Nicholas Bogel-Burroughs, Julie Bosman, Emily Cochrane, Michael Cooper, Michael Crowley, Catie Edmonson, Nicholas Fandos, Joseph Goldstein, Maggie Haberman, Amy Harmon, Lara Jakes, Cecilia Kang, John Leland, Neil MacFarquhar, Jesse McKinley, Zach Montague, Andy Newman, Elian Peltier, Alan Rappeport, Simon Romero, Marc Santora, Michael D. Shear, Knvul Sheikh, Jeanna Smialek, Mitch Smith, Matt Stevens, Matina Stevis-Gridneff, Sheryl Gay Stolberg, Eileen Sullivan, Noah Weiland, Michael Wilson and Carl Zimmer.

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